Perform some exploratory data analysis | A short run for demonstration purposes | A longer run (not executed) for scientific results | Can summarize output | Visualize correlation matrix | Make predictions from fitted model
Package: multiocc 0.2.0
multiocc: Fits Multivariate Spatio-Temporal Occupancy Model
Spatio-temporal multivariate occupancy models can handle multiple species in occupancy models. This method for fitting such models is described in Hepler and Erhardt (2021) "A spatiotemporal model for multivariate occupancy data" <https://onlinelibrary.wiley.com/doi/abs/10.1002/env.2657>.
Authors:
multiocc_0.2.0.tar.gz
multiocc_0.2.0.zip(r-4.7-any)multiocc_0.2.0.zip(r-4.6-any)multiocc_0.2.0.zip(r-4.5-any)
multiocc_0.2.0.tgz(r-4.6-any)multiocc_0.2.0.tgz(r-4.5-any)
multiocc_0.2.0.tar.gz(r-4.7-any)multiocc_0.2.0.tar.gz(r-4.6-any)
multiocc_0.2.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
multiocc/json (API)
| # Install 'multiocc' in R: |
| install.packages('multiocc', repos = c('https://heplersa.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/heplersa/multiocc/issues
Last updated from:0ab537e7c1. Checks:7 NOTE, 2 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | NOTE | 168 | ||
| source / vignettes | OK | 244 | ||
| linux-release-x86_64 | NOTE | 162 | ||
| macos-release-arm64 | NOTE | 177 | ||
| macos-oldrel-arm64 | NOTE | 224 | ||
| windows-devel | NOTE | 121 | ||
| windows-release | NOTE | 103 | ||
| windows-oldrel | NOTE | 111 | ||
| wasm-release | OK | 116 |
Exports:GibbsSamplerMakeBasismultioccbuild
Dependencies:codadeldirgmminterplatticeMASSMatrixmvtnormRcppRcppEigensandwichtmvtnormtruncnormzoo
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Coords | coords |
| Detection | detection |
| This function runs the MCMC. | GibbsSampler |
| This function constructs basis functions. It assumes coordinates form a metric. | MakeBasis |
| This function creates model.input for the GibbsSampler() function | multioccbuild |
| Occupancy | occupancy |
